CDS

Accession Number TCMCG047C14755
gbkey CDS
Protein Id GFP93320.1
Location join(635411..635515,635649..635740,635841..636012,636128..636250,636481..636654,636752..636862,636940..637021,637262..637320,637462..637560,637862..637998,638202..638299,638402..638525,638605..638692,639024..639123,639198..639250,639766..639942,640026..640063,640957..641050,641667..641846,641934..642042,642142..642211,642289..642436,642513..642641,643297..643422,643539..643604,643814..644077)
Organism Phtheirospermum japonicum
locus_tag PHJA_001476400

Protein

Length 1005aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJDB3858 BioSample:SAMD00029051
db_source BMAC01000309.1
Definition upf0202 protein at1g10490 [Phtheirospermum japonicum]
Locus_tag PHJA_001476400

EGGNOG-MAPPER Annotation

COG_category S
Description RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)- acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14521        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03008        [VIEW IN KEGG]
map03008        [VIEW IN KEGG]
GOs GO:0000049        [VIEW IN EMBL-EBI]
GO:0000154        [VIEW IN EMBL-EBI]
GO:0002097        [VIEW IN EMBL-EBI]
GO:0002101        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006400        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008033        [VIEW IN EMBL-EBI]
GO:0008080        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0016407        [VIEW IN EMBL-EBI]
GO:0016410        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016746        [VIEW IN EMBL-EBI]
GO:0016747        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0030490        [VIEW IN EMBL-EBI]
GO:0030684        [VIEW IN EMBL-EBI]
GO:0030686        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042274        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0051391        [VIEW IN EMBL-EBI]
GO:0051392        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1904812        [VIEW IN EMBL-EBI]
GO:1990882        [VIEW IN EMBL-EBI]
GO:1990883        [VIEW IN EMBL-EBI]
GO:1990884        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGGAAAAAAGTGGACGAACGCATCAGAACTCTCATTGAGAATGGCGTCAAAGCCCGCCATCGCTCCATGTTCGTCATCATTGGTGACAAATCACGCGACCAGATTGTGAATTTACATTATATGTTGAGCAAATCGGTGGTGAAGTCGAGGCCGACTGTGTTGTGGTGCTACAAGGACAAACTTGAGCTTAGCAGTCATAAAAAGAAGCGGGCCAAGCAAGTGAAAAAGTTAATGCAGAGGGGGCTGTTGGATCCAGAGAAGGTTGACCCTTTCTCACTTTTTGTTGAAACTGGAGGAATAACTTATTGCTTATACAGAGATTCCGAAAGAATTCTCGGCAACACTTTCGGCATGTGTATATTGCAGGATTTCGAAGCTTTGACACCAAATCTCCTAGCAAGAACTATTGAAACTGTTGAAGGTGGTGGATTGATAGTATTGCTGCTTCGATCTCTTTCCTCGCTCACTAGTCTTTGCACTATGGTTATGGATGTTCATGAGAGGTTTCGTACAGAATCTCATTCTCAGGCTACTGGTCGCTTTAATGAACGTTTCTTACTTTCTCTCGCGTCATGCAAATCTTGCATCGTCATGGATGATGAACTAAACATTCTACCTATTTCATCCCACGTGAAATCAATCACCCAAATTCCAGTTCAAGAGGATTCAGAAGGGCTTTTAGAAGCTGAAAGAGAACTGAAGAATTTGAAGGAACAACTGAACGATGATTTCCCTGTTGGTCCTTTAATTAGAAAGTGCTGCACAATGGACCAGGGAAAAGCCGTTGTTACATTCCTTGATGCAATTCTGGACAAGAGCCTTCGAAGCACTGTAGCTTTACTCGCTGGTCGTGGCCAGAATCTGAAAACTCTGTTTGAATTCGTATGCAAAGGATTTGATATGCTTGAATACAAGGAGCACTTGGATTTTGATGTGGTGAAAAGCACAATCCCTGATTTTAAGAAAGCAACTGTCCGGATCAATATCTACAAACAGCACAGACAGACTATTCAGTACATACAGCCACATGATCATGACAAGCTCTCGCAAGTGGAATTGTTAGTCGTTGATGAAGCGGCAGCTATACCTTTGCCTGTTGTAAAGTCCATGCTTGGTCCTTATCTTGTCTTCCTTTCATCAACCGTGAATGGCTATGAAGGTACAGGAAGGTCTTTATCTCTAAAACTGCTTCAGCAATTAGAGGAGCAACATCAGATCTCAAGTAGAAACACAGAGACTGCTGTTTCAGGTCGGCTTTTCAAAAAGATTGAATTGAGTGAATCTATCAGATATGCTTCGGGTGACCCGATTGAATCTTGGCTTAATGGTTTATTGTGTCTGGATGTAACGAACTCTATCCCTAGTATCAGCAGGCTACCCCCACCCAGTGAATGTGATCTTTACTATGTCAATCGAGATACTCTTTTCTCCTATCACAAGGACAGTGAGTTGTTTTTGCAGAGGATGATGGCTCTCAACGTTGCTTCTCACTACAAGAATACTCCAAATGATTTGCAATTAATAGCTGATGCTCCAGCCCACCACTTGTTTGTGCTACTCGGTCCTGTTGATGAGTCTAAAAATCACCTTCCTGATATTCTGTGTGTAATCCAGGTCTGCTTTGAGGGACAAATTTCTCTTAAATCTGCTCTGAAAAGCTTAAGTGATGGTTATAAGCCGTCTGGAGATCAGATACCCTGGAAACTCTGTGAACAGTTCCGTGACACAGTGCTCCCTAGTCTTTCTAGTGCTCGCATTGTGCGCATTGCCACACATCCAAATGCAATGAGGCTTGGATATGGTTCGGCTGCTGTTGAACTTTTGACAAGGTACTTTGAAGATCAACTGACTCCAATGTCTGAATTAGAAGTTGAAGATTTTCAGGAGGATTCTCAAGTCAGAGTCATTGAGGCTGCCGAAAAGGCGTCATTGCTTGAAGAAAATATAAAGCCCCGATCTGATCTTCCTCCGCTACTTGTACCCCTTCGCGAGCGGCGACCAGAAAAGCTTCATTACCTTGGAGTATCGTTTGGGCTTACTCTCGACCTTTTCCGCTTCTGGAGGAGACATAAATTCGCTCCATTGTACATTAGCCATGTCTCAAGTCTCGTGACTGGCGAACACAATTGCATGCTTGTGAGGCCGTTAAAAAACGATGACATTGAATCTAATGGATCGGACGAGTTAGACTTTTTCAGCCCCTATTATCAAGAGTTCAAGAAGAAGTTTATTAAATATTTAGCTCGTACGTTCAATCGAATGGAATACAAGCTTGCTATGAGTGTTTTGGATCCAAAAATCAACTTCTCAGACGTGGACACTGCCTCGTCATCTTCCAGTGGAGATTTGAGTTCAATCAGTGAATCGTTATCATCCTATGCTATGAAGCAACTGGAAGCATATACAAACAATCTTTCTGAACATTACATGATTGAGGATTTTGTTGACGATCTTGCCCGTGCGTACTTCTGGGGAAAGATTCCAGTCAGCTTGTCATATGCCCAGGTTTCAGTTTTGCTCTGCATTGGCTTGCAAGGAAAAGATATCCCCCGTATTCAGGAAGAGATGAAGTTGGAAAGGCAACAGATAATGTCTTTATTTATGAAAGTTATGAAGAAGTTTTACAAATACCTAAGTGGTATTTCTTCGAAAGAGACTCATCCAACCACTTCTCGCCTAAAAGATATTGCAATGGAACCTCATCCAGTATCTGTGGACGAAGATCTGAACGATGGAGCAAAACAAGTTCAGGATGACATGAAATCCAAGCTAGAGGGCTCTTTGAACCCAGATCTCCTTCAACAATACGCCATTGTCGATAAAGAAGCTGATTTTGAAAGCGCTTTGCAAAGTGGTGGTGGAAAGGCACTCTCCGGCGGTGTAATTAGCGTAAAATCCAATAAAACAAAGGCTGAGAAGCACACAAAACAATCTGAGAACGAAAAGACTGAAAAGAAGAGAAGCAAACACGACCATAGTTCTAAATCAAACAAGAAGAGAAAGTCTGGACACTAA
Protein:  
MRKKVDERIRTLIENGVKARHRSMFVIIGDKSRDQIVNLHYMLSKSVVKSRPTVLWCYKDKLELSSHKKKRAKQVKKLMQRGLLDPEKVDPFSLFVETGGITYCLYRDSERILGNTFGMCILQDFEALTPNLLARTIETVEGGGLIVLLLRSLSSLTSLCTMVMDVHERFRTESHSQATGRFNERFLLSLASCKSCIVMDDELNILPISSHVKSITQIPVQEDSEGLLEAERELKNLKEQLNDDFPVGPLIRKCCTMDQGKAVVTFLDAILDKSLRSTVALLAGRGQNLKTLFEFVCKGFDMLEYKEHLDFDVVKSTIPDFKKATVRINIYKQHRQTIQYIQPHDHDKLSQVELLVVDEAAAIPLPVVKSMLGPYLVFLSSTVNGYEGTGRSLSLKLLQQLEEQHQISSRNTETAVSGRLFKKIELSESIRYASGDPIESWLNGLLCLDVTNSIPSISRLPPPSECDLYYVNRDTLFSYHKDSELFLQRMMALNVASHYKNTPNDLQLIADAPAHHLFVLLGPVDESKNHLPDILCVIQVCFEGQISLKSALKSLSDGYKPSGDQIPWKLCEQFRDTVLPSLSSARIVRIATHPNAMRLGYGSAAVELLTRYFEDQLTPMSELEVEDFQEDSQVRVIEAAEKASLLEENIKPRSDLPPLLVPLRERRPEKLHYLGVSFGLTLDLFRFWRRHKFAPLYISHVSSLVTGEHNCMLVRPLKNDDIESNGSDELDFFSPYYQEFKKKFIKYLARTFNRMEYKLAMSVLDPKINFSDVDTASSSSSGDLSSISESLSSYAMKQLEAYTNNLSEHYMIEDFVDDLARAYFWGKIPVSLSYAQVSVLLCIGLQGKDIPRIQEEMKLERQQIMSLFMKVMKKFYKYLSGISSKETHPTTSRLKDIAMEPHPVSVDEDLNDGAKQVQDDMKSKLEGSLNPDLLQQYAIVDKEADFESALQSGGGKALSGGVISVKSNKTKAEKHTKQSENEKTEKKRSKHDHSSKSNKKRKSGH